FINE-MAPPING DESCRIPTION

Citation:
Huang et al, Nature 2017

Fine-mapping method: 
Three methods were used: two Bayesian and one MCMC based. Results from the three methods were merged and only those consistent across methods were reported. 

Association analyses:
The two Bayesian methods used the constrained multinomial regression with covariates. The MCMC method used the binomial regression with covariates

Locus definition:
Immunochip was designed with ~200 high density loci. We used the same loci definition in this fine-mapping